long_markers.RdThis is a tibble that provides an example of how to specify markers. This is particularly useful for pumping stuff into Mendel. And it is way easier than having everything in a big named list.
long_markersA data frame with necessary columns:
The name of the chromosome. This should always be an integer (or maybe "X" or "Y")
The name of the locus. This can be any string.
The position of the locus in bases along the chromosome.
The name of allele. Any string is OK
The frequency of the allele in the population
The index of the allele. These have to go from 1 up to the number of alleles at the locus. Order is immaterial.
The index of the locus within the chromosome. This goes from 1 up to the number of loci on the chromosome. These should be ordered according to Pos